BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B02SP1|AL426785
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig745 1426 0.0
>3x_Contig745
Length = 2073
Score = 1426 bits (717), Expect = 0.0
Identities = 760/767 (99%), Gaps = 6/767 (0%)
Strand = Plus / Plus
Query: 163 agtctactgaattcacagacaagttgctgaaaaatttttctagcacaaaggagatggatg 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 agtctactgaattcacagacaagttgctgaaaaatttttctagcacaaaggagatggatg 63
Query: 223 ataatattacatgttgtcctagtttcagtaagttgttgttttcttgtgtattcaaattcg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ataatattacatgttgtcctagtttcagtaagttgttgttttcttgtgtattcaaattcg 123
Query: 283 aagaaagatctatcaacgtcttcgaattttgaatgaaatgcatcaatttttctttcaaaa 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aagaaagatctatcaacgtcttcgaattttgaatgaaatgcatcaatttttctttcaaaa 183
Query: 343 ag-aatggaattgtatcctgttgctgctgctgcggttgttgttgcggatgttgttgatca 401
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aggaatggaattgtatcctgttgctgctgctgcggttgttgttgcggatgttgttgatca 243
Query: 402 gtttgatcatttcccgcgttattgctcttattctttgtcaaagctaaattcaaaagagag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtttgatcatttcccgcgttattgctcttattctttgtcaaagctaaattcaaaagagag 303
Query: 462 aaatcatgggtagatagagccaagtcagcaaggtttgcttgacttttttgttcattttct 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaatcatgggtagatagagccaagtcagcaaggtttgcttgacttttttgttcattttct 363
Query: 522 tgttgaacatttattggattcgtagtcaagtctttgataacatccctcatgaattcgtca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgttgaacatttattggattcgtagtcaagtctttgataacatccctcatgaattcgtca 423
Query: 582 tagctttgcttgaaagtgtttgagttattcagctgttgatgtagggaagtagatgacttg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagctttgcttgaaagtgtttgagttattcagctgttgatgtagggaagtagatgacttg 483
Query: 642 tacaccatgcgaataggttttggctgaattattggagccggactgtttatgttattggta 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tacaccatgcgaataggttttggctgaattattggagccggactgtttatgttattggta 543
Query: 702 gaagaagtggatgaatgtatgggtagtgaactgccactcagaagtggcatttgaggtgta 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaagaagtggatgaatgtatgggtagtgaactgccactcagaagtggcatttgaggtgta 603
Query: 762 tggttttgagagggttgtaatgtggcatgtggagcgacttgggatgccggcacagaagat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tggttttgagagggttgtaatgtggcatgtggagcgacttgggatgccggcacagaagat 663
Query: 822 ggatttgaagcagcgtgagttgtcgatgatgatgccaaacttgaag-ccctgaatgatgc 880
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 664 ggatttgaagcagcgtgagttgtcgatgatgatgccaaacttgaagcccctgaatgatgc 723
Query: 881 g-atgtactggagaag-tgttcttgaaa-wagccagt-ctcatccga 923
| |||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 724 gaatgtactggagaagttgttcttgaaataagccagtcctcatccga 770
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8658
Number of Sequences: 1807
Number of extensions: 8658
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)